Nope. Just have a directory:

    ./sql/0001_create_users.sql
    ./sql/0002_create_sessions.sql
    ....

Each query for modifying the schema is idempotent and safe to be rerun.

Then I do:

   ls ./sql | xargs -I{} wrangler d1 execute <db> --file {}

Can put that in a script to make things easy. You use the same script to modify the db as you do to bootstrap a db from scratch.